PHATRDRAFT_39093 classes i and ii superfamily (AAT_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_39093 chr_18 classes i and ii superfamily (AAT_like) 314386 316141 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0325

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0055
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent... cl18945 170.985 6.45E-48 114 - 530 specific 99734
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 170.985 6.45E-48 114 - 530 superfamily 267298
COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] - 164.37 4.57E-45 114 - 536 multi-dom 223513

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 258510 Not available 233005 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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