PHATRDRAFT_22666 chaperonin subunit 6a (TCP1_zeta)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_22666	chr_19	chaperonin subunit 6a (TCP1_zeta)	48974	50806	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0142

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0246	0.27	47 14

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TCP1_zeta		TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in...	cl02777	704.018	0	11 - 532	specific	239458
chaperonin_like superfamily		chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share...	-	704.018	0	11 - 532	superfamily	261443
groEL		chaperonin GroEL; Reviewed	-	80.1475	2.93E-16	32 - 546	multi-dom	237231

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
25279		Not available	181767	307780	433378	Cre09.g397200.t1.2	AT5G16070.1	553558

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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