PHATRDRAFT_29821 loc432087 protein (Alpha_L_fucos)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_29821	chr_19	loc432087 protein (Alpha_L_fucos)	123348	124769	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0190

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0076	0.38	820 14

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Alpha_L_fucos		Alpha-L-fucosidase; O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that...	cl12119	438.648	5.31E-151	28 - 407	specific	214829
Alpha_L_fucos superfamily		Alpha-L-fucosidase; Alpha-L-fucosidase.	-	438.648	5.31E-151	28 - 407	superfamily	264558
COG3669		Alpha-L-fucosidase [Carbohydrate transport and metabolism]	-	183.932	1.97E-52	50 - 400	multi-dom	226195

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	469809	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments