PHATRDRAFT_29824 (PLN02882)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_29824 chr_19 (PLN02882) 136480 140151 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0279

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
IleRS_core catalytic core domain of isoleucyl-tRNA synthetases; Isoleucine amino-acyl tRNA synthetases (IleRS... cl00015 329.578 1.44E-102 421 - 656 specific 173909
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 263.324 6.75E-79 40 - 182 superfamily 260139
Anticodon_Ia_Ile_ABEc Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA... cl12020 229.746 6.12E-69 656 - 865 specific 153415
Anticodon_Ia_like superfamily Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; This domain is... - 229.746 6.12E-69 656 - 865 superfamily 264512
nt_trans superfamily nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes... - 263.324 6.75E-79 40 - 182 superfamily 260139
PLN02882 aminoacyl-tRNA ligase - 2035.04 0 1 - 1166 multi-dom 215477

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36339 Not available 167622 206783 469724 Cre16.g651750.t1.2 AT4G10320.1 557837

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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