PHATRDRAFT_48753 ipt tig domain containing protein
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48753	chr_19	ipt tig domain containing protein	155219	159122	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0476

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0009	0.43	0.000000021 6000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PT superfamily		PT repeat; This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a...	-	41.2914	9.51E-05	892 - 925	superfamily	113652
PT superfamily		PT repeat; This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a...	-	41.2914	9.51E-05	892 - 925	superfamily	113652
CBM_4_9 superfamily		Carbohydrate binding domain; This family includes diverse carbohydrate binding domains.	-	37.4306	0.00451624	775 - 857	superfamily	251041

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Cre10.g436800.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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