PHATRDRAFT_22774 ribosomal proteinisoform cra_a (L7)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_22774 chr_19 ribosomal proteinisoform cra_a (L7) 388382 389101 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0151

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0126
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_L7_archeal_euk Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain... cl00203 233.573 1.25E-77 78 - 239 specific 100099
Ribosomal_L30_like superfamily Ribosomal protein L30, which is found in eukaryotes and prokaryotes but not in archaea, is one of... - 233.573 1.25E-77 78 - 239 superfamily 260257
Ribosomal_L30_N superfamily Ribosomal L30 N-terminal domain; This presumed domain is found at the N-terminus of Ribosomal L30... - 52.6136 1.25E-09 6 - 76 superfamily 254613
Ribosomal_L30_N superfamily Ribosomal L30 N-terminal domain; This presumed domain is found at the N-terminus of Ribosomal L30... - 52.6136 1.25E-09 6 - 76 superfamily 254613
L7 60S ribosomal protein L7, eukaryotic; This model describes the eukaryotic 60S (cytosolic) ribosomal... - 275.394 7.91E-93 5 - 239 multi-dom 233352

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
27167 Not available 272633 66355 446099 Cre12.g537800.t1.2 AT2G01250.1 285152

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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