PHATRDRAFT_39403 novel proteinvertebrate histidine triad nucleotide binding protein 3(zgc:136256) (DcpS_C)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_39403	chr_19	novel proteinvertebrate histidine triad nucleotide binding protein 3(zgc:136256) (DcpS_C)	412710	413501	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0444

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0010	0.55	28000 1600000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DcpS_C		Scavenger mRNA decapping enzyme C-term binding; This family consists of several scavenger mRNA...	cl00228	89.5682	1.56E-22	112 - 220	specific	256766
HIT_like superfamily		HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x...	-	89.5682	1.56E-22	112 - 220	superfamily	260280

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
31375		Not available	192582	300283	Not available	Cre03.g169200.t1.2	AT4G16566.1	506062

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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