PHATRDRAFT_48891 prolyl 4-alpha subunit domain protein (P4Hc)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48891	chr_19	prolyl 4-alpha subunit domain protein (P4Hc)	601170	602587	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0417

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0010	0.55	28000 1600000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
P4Hc		Prolyl 4-hydroxylase alpha subunit homologues; Mammalian enzymes catalyse hydroxylation of collagen...	cl17304	108.629	4.01E-28	248 - 415	specific	214780
2OG-FeII_Oxy_3 superfamily		2OG-Fe(II) oxygenase superfamily; This family contains members of the 2-oxoglutarate (2OG) and Fe(...	-	108.629	4.01E-28	248 - 415	superfamily	266616
ShKT		ShK toxin domain; ShK toxin domain	cl15839	39.6701	0.000107934	138 - 172	specific	214586
ShK superfamily		ShK domain-like; This domain of is found in several C. elegans proteins. The domain is 30 amino...	-	39.6701	0.000107934	138 - 172	superfamily	265801

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
10787		Not available	206670	243855	465463	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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