PHATRDRAFT_32539 sjchgc07023 protein (Mod_r superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_32539	chr_2	sjchgc07023 protein (Mod_r superfamily)	171937	172845	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0408

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0235	0.24	1000 1900

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Mod_r superfamily		Modifier of rudimentary (Mod(r)) protein; This family represents a conserved region approximately...	-	68.8555	1.36E-14	141 - 290	superfamily	254100
PTH superfamily		Peptidyl-tRNA hydrolase (PTH) is a monomeric protein that cleaves the ester bond linking the...	-	39.0265	0.000464432	35 - 90	superfamily	260375

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268881		Not available	215058	50756	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments