PHATRDRAFT_43359 hypothetical loc588416 (RRM1_TatSF1_like)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_43359 chr_2 hypothetical loc588416 (RRM1_TatSF1_like) 238226 240358 -
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0169
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RRM1_TatSF1_like RNA recognition motif 1 in HIV Tat-specific factor 1 (Tat-SF1) and similar proteins; This subfamily... cl17169 151.532 1.81E-43 412 - 511 specific 240727
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 88.0478 9.08E-21 556 - 651 superfamily 266524
RRM_SF superfamily RNA recognition motif (RRM) superfamily; RRM, also known as RBD (RNA binding domain) or RNP (... - 88.0478 9.08E-21 556 - 651 superfamily 266524
DUF4339 superfamily Domain of unknown function (DUF4339); This domain is found in bacteria, archaea and eukaryotes, and... - 36.8159 0.00203658 220 - 264 superfamily 206405
COG0724 RNA-binding proteins (RRM domain) [General function prediction only] - 57.2642 3.93E-09 302 - 527 multi-dom 223796
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268839 Not available 194212 101088 Not available Cre17.g707050.t1.2 AT5G16260.1 311360
KEGG description KEGG Pathway
Not available Not available
Not available -
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