PHATRDRAFT_32559 abc transporter-like protein (ABC_ATPase superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_32559	chr_2	abc transporter-like protein (ABC_ATPase superfamily)	244613	245698	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0487

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0169	0.42	430 6300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ABC_ATPase superfamily		ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of...	-	111.79	5.77E-29	24 - 250	superfamily	266551
CbiO		ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]	-	100.793	5.62E-25	20 - 263	multi-dom	224047

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23811		Not available	274686	222900	456116	Cre17.g731050.t1.2	AT5G02270.1	490630

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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