PHATRDRAFT_18087 adenylosuccinate lyase (Adenylsuccinate_lyase_2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_18087	chr_2	adenylosuccinate lyase (Adenylsuccinate_lyase_2)	310365	311960	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0143

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0209	0.23	92 340

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Adenylsuccinate_lyase_2		Adenylsuccinate lyase (ASL)_subgroup 2; This subgroup contains mainly eukaryotic proteins similar...	cl00013	757.62	0	30 - 465	specific	176471
Lyase_I_like superfamily		Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and...	-	757.62	0	30 - 465	superfamily	260138
PurB		Adenylosuccinate lyase [Nucleotide transport and metabolism]	-	410.855	5.64E-139	30 - 476	multi-dom	223094

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
bd1515		Not available	167203	249540	Not available	Not available	Not available	325085

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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