PHATRDRAFT_25218 abc transporter family protein (ABC_ATPase superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_25218 chr_2 abc transporter family protein (ABC_ATPase superfamily) 320900 322696 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0354

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0163
 0.35

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 190.56 1.55E-56 22 - 254 superfamily 266551
ABC2_membrane ABC-2 type transporter; ABC-2 type transporter. cl17235 116.588 4.84E-30 331 - 542 specific 250332
ABC2_membrane superfamily ABC-2 type transporter; ABC-2 type transporter. - 116.588 4.84E-30 331 - 542 superfamily 266576
L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group; A gene pair with a fairly wide... - 85.3596 5.29E-19 38 - 232 multi-dom 188353
COG0842 ABC-type multidrug transport system, permease component [Defense mechanisms] - 41.0708 0.000409041 359 - 536 multi-dom 223912

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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