PHATRDRAFT_54092 myb domain-containing protein (SWIRM)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_54092	chr_2	myb domain-containing protein (SWIRM)	510629	512653	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0204

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0083	0.30	300 13000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SWIRM superfamily		SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues...	-	56.8663	4.81E-10	362 - 442	superfamily	252594
SWIRM superfamily		SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues...	-	56.8663	4.81E-10	362 - 442	superfamily	252594

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
25142		Not available	145049	259214	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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