PHATRDRAFT_43459 serine arginine repetitive matrixisoform cra_a
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43459	chr_2	serine arginine repetitive matrixisoform cra_a	515612	517112	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0303

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
OmpH		Outer membrane protein (OmpH-like); This family includes outer membrane proteins such as OmpH among...	cl19113	36.0687	0.00648542	174 - 230	specific	252261
ApoLp-III_like superfamily		Apolipophorin-III and similar insect proteins; Exchangeable apolipoproteins play vital roles in the...	-	36.0687	0.00648542	174 - 230	superfamily	267466

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21700		Not available	264145	297647	Not available	Not available	Not available	541906

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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