PHATRDRAFT_32747 mitochondrial glyceraldehyde-3-phosphate dehydrogenase (GapA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_32747 chr_2 mitochondrial glyceraldehyde-3-phosphate dehydrogenase (GapA) 715026 716234 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0173

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0195
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Gp_dh_C Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; GAPDH is a tetrameric NAD-binding... cl19935 277.897 1.76E-93 158 - 315 specific 251539
Gp_dh_C superfamily Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; GAPDH is a tetrameric NAD-binding... - 277.897 1.76E-93 158 - 315 superfamily 268288
Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; GAPDH is a tetrameric NAD-binding... cl17742 224.693 6.47E-73 3 - 153 specific 249536
Gp_dh_N superfamily Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; GAPDH is a tetrameric NAD-binding... - 224.693 6.47E-73 3 - 153 superfamily 266804
GapA Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate... - 482.056 5.17E-171 3 - 334 multi-dom 223135

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
28239 Not available 275634 253151 Not available Cre12.g485150.t1.2 AT1G13440.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments