PHATRDRAFT_41745 loc496075 protein (UPF0160)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_41745	chr_2	loc496075 protein (UPF0160)	810497	811552	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0141

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0098	0.29	990 110

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UPF0160		Uncharacterized protein family (UPF0160); This family of proteins contains a large number of metal...	cl01749	410.432	6.53E-143	17 - 343	specific	252102
UPF0160 superfamily		Uncharacterized protein family (UPF0160); This family of proteins contains a large number of metal...	-	410.432	6.53E-143	17 - 343	superfamily	261050

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
832		Not available	230394	325349	418635	Cre02.g118900.t1.2	AT5G41970.1	351392

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments