PHATRDRAFT_32830 ribonucleaselarge subunit (RNase_HII_eukaryota_like)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_32830	chr_2	ribonucleaselarge subunit (RNase_HII_eukaryota_like)	897041	898313	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0108

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0105	0.29	0.0053 390

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RNase_HII_eukaryota_like		Eukaryotic RNase HII; This family includes eukaryotic type 2 RNase H (RNase HII or H2) which is...	cl14782	362.607	5.77E-125	114 - 334	specific	260002
RNase_H_like superfamily		Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of...	-	362.607	5.77E-125	114 - 334	superfamily	265450

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
17008		Not available	255174	323232	462234	Cre17.g701350.t1.1	AT2G25100.1	545238

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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