PHATRDRAFT_1341 hypothetical alcohol dehydrogenase (PRK02106)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_1341 chr_2 hypothetical alcohol dehydrogenase (PRK02106) 967216 968993 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0176

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0196
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GMC_oxred_C superfamily GMC oxidoreductase; This domain found associated with pfam00732. - 129.813 1.18E-35 400 - 532 superfamily 253079
GMC_oxred_C superfamily GMC oxidoreductase; This domain found associated with pfam00732. - 129.813 1.18E-35 400 - 532 superfamily 253079
NAD_binding_8 superfamily NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. - 125.472 3.74E-33 56 - 297 superfamily 267487
lycopene_cycl superfamily lycopene cyclase; This model represents a family of bacterial lycopene cyclases catalyzing the... - 38.3072 0.00349068 2 - 35 superfamily 130849
PRK02106 choline dehydrogenase; Validated - 488.957 3.67E-167 1 - 536 multi-dom 235000

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
41650 Not available 186935 323118 441720 Cre12.g514200.t1.2 AT1G73050.1 473674

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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