PHATRDRAFT_33028 allergen v5 tpx-1 related (SCP_bacterial)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_33028	chr_2	allergen v5 tpx-1 related (SCP_bacterial)	1355083	1355805	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0354

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0182	0.31	1400 320

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SCP_bacterial		SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea. The wider...	cl00133	69.7352	1.68E-15	129 - 238	specific	240179
SCP superfamily		SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes. This family...	-	69.7352	1.68E-15	129 - 238	superfamily	260208

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	240005	302504	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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