PHATRDRAFT_9886 neutral sphingomyelinase (n-smase) activation associated factor (Beach)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_9886	chr_2	neutral sphingomyelinase (n-smase) activation associated factor (Beach)	1392035	1392727	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Beach		BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a...	cl10511	326.122	2.51E-112	1 - 230	specific	100117
Beach superfamily		BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a...	-	326.122	2.51E-112	1 - 230	superfamily	263990

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269169		Not available	201223	193283	Not available	Cre06.g274950.t1.1	Not available	545170

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments