PHATRDRAFT_43774 formin 2 (Nup54 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43774	chr_2	formin 2 (Nup54 superfamily)	1436892	1438152	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0147

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0248	0.29	190 490

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Nup54 superfamily		Nucleoporin complex subunit 54; This is the human Nup54 subunit of the nucleoporin complex,...	-	76.9001	5.94E-17	246 - 361	superfamily	258141
Nucleoporin_FG superfamily		Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in...	-	41.6487	3.90E-05	69 - 140	superfamily	257944
Nucleoporin_FG superfamily		Nucleoporin FG repeat region; This family includes a number of FG repeats that are found in...	-	41.6487	3.90E-05	69 - 140	superfamily	257944

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	209764	198837	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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