PHATRDRAFT_48918 vesicle-associated membrane(major sperm protein)transmembrane domain or gpi at c (Motile_Sperm)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48918	chr_20	vesicle-associated membrane(major sperm protein)transmembrane domain or gpi at c (Motile_Sperm)	27199	28261	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0297

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Motile_Sperm superfamily		MSP (Major sperm protein) domain; Major sperm proteins are involved in sperm motility. These...	-	83.9438	2.33E-20	4 - 128	superfamily	250017
Motile_Sperm superfamily		MSP (Major sperm protein) domain; Major sperm proteins are involved in sperm motility. These...	-	83.9438	2.33E-20	4 - 128	superfamily	250017
SCS2		VAMP-associated protein involved in inositol metabolism [Intracellular trafficking and secretion]	-	63.0586	5.89E-12	3 - 252	multi-dom	227398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21060		Not available	166304	194171	Not available	Not available	AT4G00170.1	353719

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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