PHATRDRAFT_15595 tryptophanyl-trna synthetase (PRK00927)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_15595	chr_20	tryptophanyl-trna synthetase (PRK00927)	83339	84421	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0135

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0085	0.45	490000 680000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TrpRS_core		catalytic core domain of tryptophanyl-tRNA synthetase; Tryptophanyl-tRNA synthetase (TrpRS)...	cl00015	351.886	2.39E-120	1 - 308	specific	173903
nt_trans superfamily		nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes...	-	351.886	2.39E-120	1 - 308	superfamily	260139
PRK00927		tryptophanyl-tRNA synthetase; Reviewed	-	529.275	0	1 - 354	multi-dom	234866

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3461		Not available	192001	297628	426613	Cre05.g238322.t1.1	AT2G25840.1	491535

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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