PHATRDRAFT_15508 pre-mrna cleavage complex family protein (CLP1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_15508 chr_20 pre-mrna cleavage complex family protein (CLP1) 131157 132659 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0242

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Clp1 superfamily Pre-mRNA cleavage complex II protein Clp1; This family consists of several pre-mRNA cleavage... - 106.228 6.69E-27 221 - 461 superfamily 253921
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 50.1501 8.08E-08 103 - 150 superfamily 266552
CLP1 Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and... - 171.663 4.70E-48 2 - 461 multi-dom 227910

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 192093 203840 448862 Cre03.g194800.t1.2 AT3G04680.2 463462

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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