PHATRDRAFT_48960 gamma response i proteinPhaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48960	chr_20	gamma response i protein	154390	156699	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0109

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0042	0.42	4.5 570

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SAE2 superfamily		DNA repair protein endonuclease SAE2/CtIP C-terminus; SAE2 is a protein involved in repairing...	-	44.7671	8.25E-06	677 - 745	superfamily	254891

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	242327	Not available	Not available	Not available	Not available	361638

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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