PHATRDRAFT_30113 lipoamide dehydrogenase (PRK06416)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_30113	chr_20	lipoamide dehydrogenase (PRK06416)	551914	553773	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0226

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0107	0.29	1500 220

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Pyr_redox_dim superfamily		Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both class...	-	115.352	1.04E-30	421 - 533	superfamily	251571
Pyr_redox_dim superfamily		Pyridine nucleotide-disulphide oxidoreductase, dimerization domain; This family includes both class...	-	115.352	1.04E-30	421 - 533	superfamily	251571
Pyr_redox superfamily		Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II...	-	65.6575	3.53E-13	238 - 304	superfamily	249559
Pyr_redox superfamily		Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II...	-	65.6575	3.53E-13	238 - 304	superfamily	249559
PRK06416		dihydrolipoamide dehydrogenase; Reviewed	-	579.023	0	60 - 543	multi-dom	235798

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24399		Not available	186500	38634	420435	Cre01.g016514.t1.1	AT4G16155.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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