PHATRDRAFT_23083 translation elongation factor tu (PLN03127)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_23083 chr_21 translation elongation factor tu (PLN03127) 403547 404963 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0153

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0133
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EF_Tu Elongation Factor Tu (EF-Tu) GTP-binding proteins; EF-Tu subfamily. This subfamily includes... cl17170 379.235 2.16E-131 41 - 235 specific 206671
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 379.235 2.16E-131 41 - 235 superfamily 266525
EFTU_III Domain III of elongation factor (EF) Tu. Ef-Tu consists of three structural domains, designated I,... cl02786 175.421 1.15E-53 332 - 421 specific 239678
Translation_factor_III superfamily Domain III of Elongation factor (EF) Tu (EF-TU) and EF-G. Elongation factors (EF) EF-Tu and EF-G... - 175.421 1.15E-53 332 - 421 superfamily 261448
EFTU_II EFTU_II: Elongation factor Tu domain II. Elongation factors Tu (EF-Tu) are three-domain GTPases... cl02787 154.203 1.48E-45 243 - 329 specific 239668
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 154.203 1.48E-45 243 - 329 superfamily 261449
PLN03127 Elongation factor Tu; Provisional - 777.08 0 1 - 426 multi-dom 178673

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269616 Not available 214803 220646 240795 Cre06.g259150.t1.2 AT4G02930.1 354895

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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