PHATRDRAFT_49312 (SPS1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49312 chr_21 (SPS1) 547167 551945 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0346

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0202
 0.37

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 69.6712 6.36E-13 1156 - 1500 superfamily 238121
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 67.2617 2.12E-12 38 - 313 superfamily 263920
SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms... - 72.4672 2.78E-13 38 - 413 multi-dom 223589
COG2319 FOG: WD40 repeat [General function prediction only] - 45.8499 7.82E-05 1234 - 1591 multi-dom 225201
COG2319 FOG: WD40 repeat [General function prediction only] - 45.8499 7.82E-05 1234 - 1591 multi-dom 225201

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
3934 Not available 208793 189189 247087 Cre06.g290500.t1.1 AT4G29380.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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