PHATRDRAFT_15977 non-phototropic hypocotyl nph1 (PAS_9)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_15977 chr_22 non-phototropic hypocotyl nph1 (PAS_9) 299328 299654 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0179

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0015
 0.37

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 40.3091 5.54E-06 14 - 104 superfamily 238075
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 40.3091 5.54E-06 14 - 104 superfamily 238075
PAS_9 PAS domain; PAS domain. - 87.0535 3.61E-23 5 - 105 multi-dom 257751

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
20065 Not available 204529 294561 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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