PHATRDRAFT_49480 epsilon-trimethyllysine 2-oxoglutarate dioxygenase (carnitine_bodg)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49480	chr_22	epsilon-trimethyllysine 2-oxoglutarate dioxygenase (carnitine_bodg)	377020	378512	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0066

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0091	0.41

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CAS_like superfamily		Clavaminic acid synthetase (CAS) -like; CAS is a trifunctional Fe(II)/ 2-oxoglutarate (2OG)...	-	101.32	2.48E-24	251 - 451	superfamily	260242
carnitine_bodg		gamma-butyrobetaine hydroxylase; Members of this protein family are gamma-butyrobetaine hydroxylase...	-	127.968	4.75E-33	56 - 455	multi-dom	233854

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
6667		Not available	262191	325206	451329	Not available	Not available	566756

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments