PHATRDRAFT_23253 mate efflux family protein (MATE_DinF_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_23253	chr_22	mate efflux family protein (MATE_DinF_like)	394475	395953	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0005

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0072	0.33	11 13000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MATE_DinF_like		DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like...	cl09326	292.928	1.56E-93	34 - 479	specific	240541
MATE_like superfamily		Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins...	-	292.928	1.56E-93	34 - 479	superfamily	263758
NorM		Na+-driven multidrug efflux pump [Defense mechanisms]	-	161.238	6.47E-44	37 - 477	multi-dom	223608

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269448		Not available	223195	162569	Not available	Cre04.g213000.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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