PHATRDRAFT_49500 non-ribosomal peptide synthetase (AFD_class_I superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49500 chr_22 non-ribosomal peptide synthetase (AFD_class_I superfamily) 424978 428084 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0392

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0162
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 96.6838 5.33E-23 804 - 956 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 96.6838 5.33E-23 804 - 956 superfamily 238125
AFD_class_I superfamily Adenylate forming domain, Class I; This family includes acyl- and aryl-CoA ligases, as well as the... - 238.659 2.99E-69 220 - 624 superfamily 266508
AA-adenyl-dom amino acid adenylation domain; This model represents a domain responsible for the specific... - 204.413 1.56E-57 97 - 526 multi-dom 233550
Ank_2 Ankyrin repeats (3 copies); Ankyrin repeats (3 copies). - 60.3475 7.82E-11 765 - 889 multi-dom 257303
Ank_4 Ankyrin repeats (many copies); Ankyrin repeats (many copies). - 42.6228 3.64E-05 894 - 956 multi-dom 257947

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
11612 Not available 243715 Not available 468086 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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