PHATRDRAFT_23286 3-5 exoribonuclease ph component of the exosome (RNase_PH superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_23286	chr_22	3-5 exoribonuclease ph component of the exosome (RNase_PH superfamily)	482741	483565	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0154	0.20	20000 42000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RNase_PH superfamily		RNase PH-like 3'-5' exoribonucleases; RNase PH-like 3'-5'...	-	260.168	1.74E-86	16 - 256	superfamily	261591
PRK03983		exosome complex exonuclease Rrp41; Provisional	-	172.511	3.59E-52	15 - 254	multi-dom	235187

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
17841		Not available	199423	151678	463559	Cre06.g284500.t1.2	AT3G61620.2	504652

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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