PHATRDRAFT_40278 (DUF285)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_40278 chr_22 (DUF285) 584499 587303 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0278

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0021
 0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PKc Catalytic domain of Protein Kinases; Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the... cl09925 145.072 5.88E-39 236 - 449 specific 173623
PKc_like superfamily Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the... - 145.072 5.88E-39 236 - 449 superfamily 263920
Liste_lipo_26 superfamily bacterial surface protein 26-residue repeat; This model describes a tandem peptide repeat sequence... - 36.302 0.0040378 706 - 729 superfamily 213686
Liste_lipo_26 superfamily bacterial surface protein 26-residue repeat; This model describes a tandem peptide repeat sequence... - 36.302 0.0040378 706 - 729 superfamily 213686
DUF285 Mycoplasma protein of unknown function, DUF285; This region appears distantly related to leucine... - 177.46 1.05E-51 776 - 895 multi-dom 251913
DUF285 Mycoplasma protein of unknown function, DUF285; This region appears distantly related to leucine... - 177.46 1.05E-51 776 - 895 multi-dom 251913
S_TKc Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-... - 132.268 3.86E-34 234 - 516 multi-dom 214567

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 159779 Not available Not available Not available AT3G53840.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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