PHATRDRAFT_49608 assembly protein (UPF0051)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49608	chr_23	assembly protein (UPF0051)	186060	188132	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0152

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0126	0.29	160 17000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UPF0051		Uncharacterized protein family (UPF0051); Uncharacterized protein family (UPF0051).	cl19515	215.138	1.09E-64	377 - 642	specific	250635
UPF0051 superfamily		Uncharacterized protein family (UPF0051); Uncharacterized protein family (UPF0051).	-	215.138	1.09E-64	377 - 642	superfamily	267868

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
268364		Not available	242837	42468	454654	Cre12.g513950.t1.2	AT1G32500.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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