PHATRDRAFT_49725 (NYN)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49725	chr_24	(NYN)	70155	71360	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0300

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0028	0.40	0.011 0.03

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NYN		NYN domain; These domains are found in the eukaryotic proteins typified by the Nedd4-binding...	cl10034	91.5717	1.98E-22	11 - 160	specific	250981
LabA_like/DUF88 superfamily		LabA_like proteins; The LabA-like superfamily is composed of a well conserved group of bacterial...	-	91.5717	1.98E-22	11 - 160	superfamily	263953
COG1432		Uncharacterized conserved protein [Function unknown]	-	43.5533	1.72E-05	67 - 171	multi-dom	224349

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	95007	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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