PHATRDRAFT_40621 gtp-binding protein (TypA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_40621 chr_24 gtp-binding protein (TypA) 473824 476038 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0140

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0246
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BipA_TypA_C BipA_TypA_C: a C-terminal portion of BipA or TypA having homology to the C terminal domains of the... cl02785 108.361 4.65E-28 469 - 549 specific 239681
Elongation_Factor_C superfamily Elongation factor G C-terminus. This domain includes the carboxyl terminal regions of elongation... - 108.361 4.65E-28 469 - 549 superfamily 261447
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 270.234 9.28E-86 25 - 238 superfamily 266525
Translation_Factor_II_like superfamily Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor... - 74.0568 5.76E-16 263 - 355 superfamily 261449
TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] - 685.122 0 22 - 677 multi-dom 224138

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
268714 Not available 205590 319997 Not available Cre13.g606000.t1.2 AT2G31060.2 536873

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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