PHATRDRAFT_40626 nuclear rna binding (HABP4_PAI-RBP1)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_40626	chr_24	nuclear rna binding (HABP4_PAI-RBP1)	488508	489601	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0130

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0133	0.27	7.9 370

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HABP4_PAI-RBP1 superfamily		Hyaluronan / mRNA binding family; This family includes the HABP4 family of hyaluronan-binding...	-	53.1878	2.31E-09	60 - 151	superfamily	252793
HABP4_PAI-RBP1 superfamily		Hyaluronan / mRNA binding family; This family includes the HABP4 family of hyaluronan-binding...	-	53.1878	2.31E-09	60 - 151	superfamily	252793

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
20570		Not available	267303	68670	Not available	Not available	Not available	353485

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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