PHATRDRAFT_16408 lysosomal trafficking regulator lyst and related beach and wd40 repeat proteins (Beach)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_16408	chr_25	lysosomal trafficking regulator lyst and related beach and wd40 repeat proteins (Beach)	129370	130125	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0224

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0135	0.29	3000 1200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Beach		BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a...	cl10511	390.836	1.65E-137	1 - 252	specific	100117
Beach superfamily		BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a...	-	390.836	1.65E-137	1 - 252	superfamily	263990

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
29778		Not available	210384	189768	72186	Not available	AT2G45540.1	486642

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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