PHATRDRAFT_1241 dna topoisomerase i (TOP1Ac)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_1241 chr_25 dna topoisomerase i (TOP1Ac) 296666 298282 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0127
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TOP1Ac superfamily DNA Topoisomerase, subtype IA; DNA-binding, ATP-binding and catalytic domain of bacterial DNA... - 329.566 5.45E-108 155 - 520 superfamily 238110
TOP1Ac superfamily DNA Topoisomerase, subtype IA; DNA-binding, ATP-binding and catalytic domain of bacterial DNA... - 329.566 5.45E-108 155 - 520 superfamily 238110
TOPRIM_TopoIA_TopoI TOPRIM_TopoIA_TopoI: The topoisomerase-primase (TORPIM) domain found in members of the type IA... cl00718 164.657 2.02E-48 1 - 150 specific 173783
TOPRIM superfamily Topoisomerase-primase domain. This is a nucleotidyl transferase/hydrolase domain found in type IA,... - 164.657 2.02E-48 1 - 150 superfamily 260587

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 261807 262946 467912 Cre10.g442850.t1.1 AT4G31210.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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