PHATRDRAFT_49985 amino acid transporter (Aa_trans superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49985	chr_26	amino acid transporter (Aa_trans superfamily)	38424	39941	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0150

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0090	0.41	0.000000000055 7600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Aa_trans superfamily		Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid...	-	109.31	2.47E-26	100 - 498	superfamily	266708
SdaC		Amino acid permeases [Amino acid transport and metabolism]	-	75.3804	5.59E-15	108 - 498	multi-dom	223884

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	186398	199976	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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