PHATRDRAFT_50004 s-layer domain protein
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50004 chr_26 s-layer domain protein 112055 113092 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0265

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0005
 0.48

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Excalibur Excalibur calcium-binding domain; Extracellular Ca2+-dependent nuclease YokF from Bacillus subtilis... cl05460 39.0707 0.000140156 289 - 326 specific 253448
Excalibur superfamily Excalibur calcium-binding domain; Extracellular Ca2+-dependent nuclease YokF from Bacillus subtilis... - 39.0707 0.000140156 289 - 326 superfamily 262545
SNc superfamily Staphylococcal nuclease homologues. SNase homologues are found in bacteria, archaea, and eukaryotes... - 37.2538 0.00124478 105 - 240 superfamily 238102

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
4640 Not available 233330 198970 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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