PHATRDRAFT_50034 emb2742 (embryo defective 2742) ctp synthase (PLN02327)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50034	chr_26	emb2742 (embryo defective 2742) ctp synthase (PLN02327)	210832	212507	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0244

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0152	0.19	3600 5100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GATase1_CTP_Synthase		Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase; Type...	cl00020	337.603	8.21E-113	295 - 532	specific	153217
GAT_1 superfamily		Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1...	-	337.603	8.21E-113	295 - 532	superfamily	260141
CTP_synth_N		CTP synthase N-terminus; This family consists of the N-terminal region of the CTP synthase protein...	cl17203	490.064	9.49E-172	1 - 281	specific	253716
Fer4_NifH superfamily		The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain....	-	490.064	9.49E-172	1 - 281	superfamily	266552
PLN02327		CTP synthase	-	1015.72	0	1 - 546	multi-dom	215186

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
269080		Not available	226043	209401	73959	Cre09.g406050.t1.2	AT4G20320.2	344165

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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