PHATRDRAFT_40901 tryptophanyl-trna synthetase (TrpRS_core)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_40901	chr_26	tryptophanyl-trna synthetase (TrpRS_core)	231174	232391	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0140

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0230	0.25	25000 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TrpRS_core		catalytic core domain of tryptophanyl-tRNA synthetase; Tryptophanyl-tRNA synthetase (TrpRS)...	cl00015	297.958	1.21E-98	76 - 375	specific	173903
nt_trans superfamily		nucleotidyl transferase superfamily; nt_trans (nucleotidyl transferase) This superfamily includes...	-	297.958	1.21E-98	76 - 375	superfamily	260139

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
43160		Not available	268525	253989	455075	Cre12.g522350.t1.2	AT3G04600.3	498780

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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