PHATRDRAFT_50061 pentatricopeptiderepeat-containing protein (PPR_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50061 chr_26 pentatricopeptiderepeat-containing protein (PPR_2) 278899 281915 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0028

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0009
 0.43

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PPR_2 PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... cl03252 54.331 3.52E-09 690 - 745 specific 257477
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 35.4562 0.00835166 537 - 593 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 35.4562 0.00835166 537 - 593 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 35.4562 0.00835166 537 - 593 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 35.4562 0.00835166 537 - 593 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 35.4562 0.00835166 537 - 593 superfamily 261658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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