PHATRDRAFT_40933 atp-dependent clpproteolytic subunit (S14_ClpP_2)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_40933	chr_26	atp-dependent clpproteolytic subunit (S14_ClpP_2)	302522	303187	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0181

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0120	0.36	4800 5800

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
S14_ClpP_2		Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease; Clp protease (...	cl15763	316.691	7.43E-111	2 - 172	specific	132928
Clp_protease_like superfamily		Caseinolytic protease (ClpP) is an ATP-dependent protease; Clp protease (caseinolytic protease;...	-	316.691	7.43E-111	2 - 172	superfamily	265774

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
866		Not available	170022	212046	465547	Cre12.g486100.t1.2	AT1G02560.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments