PHATRDRAFT_2032 nitrate transporter (2A0108)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_2032	chr_26	nitrate transporter (2A0108)	379755	381175	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0393

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0054	0.38	630 2100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MFS superfamily		The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that...	-	74.6577	5.17E-15	34 - 424	superfamily	119392
MFS superfamily		The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that...	-	74.6577	5.17E-15	34 - 424	superfamily	119392
2A0108		nitrite extrusion protein (nitrite facilitator); [Transport and binding proteins, Anions].	-	253.411	1.22E-79	30 - 390	multi-dom	233170

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	62811	Cre09.g410800.t1.2	AT1G12940.1	317694

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments