PHATRDRAFT_50115 isoform cra_b (GYF)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_50115 chr_27 isoform cra_b (GYF) 85482 86696 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0343

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0037
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GYF GYF domain; The GYF domain is named because of the presence of Gly-Tyr-Phe residues. The GYF domain... cl00072 49.6664 3.78E-08 314 - 352 specific 251161
GYF superfamily GYF domain: contains conserved Gly-Tyr-Phe residues; Proline-binding domain in CD2-binding and... - 49.6664 3.78E-08 314 - 352 superfamily 260172
NTR2 superfamily Nineteen complex-related protein 2; NTR2 or Nineteen complex-related protein 2 is a family of... - 36.5891 0.00621868 52 - 117 superfamily 259589

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23074 Not available Not available 293366 Not available Not available Not available 484481

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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