PHATRDRAFT_23798 kelch repeat-containing protein (DUF4110)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_23798 chr_27 kelch repeat-containing protein (DUF4110) 112414 114807 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0181
 0.26

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF4110 superfamily Domain of unknown function (DUF4110); This is a family that is found predominantly at the C-... - 94.7233 5.15E-23 604 - 691 superfamily 257747
DUF4110 superfamily Domain of unknown function (DUF4110); This is a family that is found predominantly at the C-... - 94.7233 5.15E-23 604 - 691 superfamily 257747
Kelch_3 Galactose oxidase, central domain; Galactose oxidase, central domain. cl02701 44.5877 5.83E-06 152 - 206 specific 257740
Kelch_3 superfamily Galactose oxidase, central domain; Galactose oxidase, central domain. - 34.9062 0.00846779 485 - 525 superfamily 261412
Kelch_3 Galactose oxidase, central domain; Galactose oxidase, central domain. cl02701 44.5877 5.83E-06 152 - 206 specific 257740
Kelch_3 superfamily Galactose oxidase, central domain; Galactose oxidase, central domain. - 34.9062 0.00846779 485 - 525 superfamily 261412
Kelch_5 Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six... cl02701 34.9062 0.00846779 485 - 525 specific 258125
Kelch_3 superfamily Galactose oxidase, central domain; Galactose oxidase, central domain. - 34.9062 0.00846779 485 - 525 superfamily 261412
Kelch_5 Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six... cl02701 34.9062 0.00846779 485 - 525 specific 258125
Kelch_3 superfamily Galactose oxidase, central domain; Galactose oxidase, central domain. - 34.9062 0.00846779 485 - 525 superfamily 261412

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37705 Not available 205433 155728 95019 Cre09.g398200.t1.2 AT5G50310.1 491177

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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